Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase, b subunit | PMI12_04998 | Not Available | Negative | 5254468 - 5254947 | 17582.5 |
| nadh:ubiquinone oxidoreductase subunit 3 (chain a) | PMI12_04999 | Not Available | Negative | 5254963 - 5255352 | 14420.0 |
| Trna-leu | Not Available | Not Available | Positive | 5255390 - 5255474 | Not Available |
| protein translocase, secg subunit | PMI12_05001 | Not Available | Negative | 5255595 - 5255996 | 12543.3 |
| triosephosphate isomerase | PMI12_05002 | Not Available | Negative | 5256033 - 5256797 | 26072.2 |
| putative nad(p)h quinone oxidoreductase, pig3 family | PMI12_05003 | Not Available | Negative | 5256811 - 5257809 | 34518.8 |
| polyribonucleotide nucleotidyltransferase | PMI12_05004 | Not Available | Negative | 5257899 - 5260199 | 83369.8 |
| ribosomal protein s15 | PMI12_05005 | Not Available | Negative | 5260405 - 5260671 | 9889.12 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_05006 | Not Available | Negative | 5260786 - 5261525 | 26665.3 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_05007 | Not Available | Negative | 5261530 - 5262483 | 34046.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
