Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug resistance transporter, emrb/qaca subfamily | PMI12_04978 | Not Available | Negative | 5232570 - 5234132 | 55832.9 |
| multidrug resistance efflux pump | PMI12_04979 | Not Available | Negative | 5234170 - 5235492 | 45713.3 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | PMI12_04980 | Not Available | Negative | 5235541 - 5237016 | 51506.1 |
| transcriptional regulator | PMI12_04981 | Not Available | Negative | 5237009 - 5237626 | 22749.9 |
| abc-type multidrug transport system, atpase and permease component | PMI12_04982 | Not Available | Positive | 5237649 - 5239409 | 62242.6 |
| hypothetical protein | PMI12_04983 | Not Available | Negative | 5239432 - 5239884 | 16111.3 |
| ntp pyrophosphohydrolase | PMI12_04984 | Not Available | Negative | 5239892 - 5240503 | 22496.5 |
| protein of unknown function (duf2818) | PMI12_04985 | Not Available | Negative | 5240508 - 5240813 | 11183.9 |
| proton-translocating nadh-quinone oxidoreductase, chain n | PMI12_04986 | Not Available | Negative | 5240829 - 5242316 | 52693.1 |
| proton-translocating nadh-quinone oxidoreductase, chain m | PMI12_04987 | Not Available | Negative | 5242341 - 5243819 | 53784.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
