Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopropylmalate/homocitrate/citramalate synthase | PMI12_04968 | Not Available | Positive | 5221671 - 5222618 | 32987.0 |
| putative acyl-coa transferase/carnitine dehydratase | PMI12_04969 | Not Available | Positive | 5222611 - 5223801 | 43087.3 |
| hypothetical protein | PMI12_04970 | Not Available | Positive | 5223806 - 5224786 | 33905.2 |
| transcriptional regulator | PMI12_04971 | Not Available | Positive | 5224828 - 5225754 | 33580.2 |
| sel1 repeat protein | PMI12_04972 | Not Available | Negative | 5225948 - 5226366 | 15907.8 |
| tpr repeat-containing protein | PMI12_04973 | Not Available | Negative | 5226446 - 5227750 | 47916.6 |
| hypothetical protein | PMI12_04974 | Not Available | Negative | 5227886 - 5229961 | 77060.9 |
| hypothetical protein | PMI12_04975 | Not Available | Negative | 5230015 - 5231437 | 50590.0 |
| hypothetical protein | PMI12_04976 | Not Available | Negative | 5231438 - 5231553 | 4105.07 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_04977 | Not Available | Negative | 5231553 - 5232323 | 28048.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
