Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_04958 | Not Available | Negative | 5212078 - 5212314 | 8234.94 |
| 6-phosphofructokinase | PMI12_04959 | Not Available | Negative | 5212311 - 5213567 | 45060.8 |
| enoyl-coa hydratase/carnithine racemase | PMI12_04960 | Not Available | Negative | 5213623 - 5214426 | 29054.1 |
| protein of unknown function (duf2917) | PMI12_04961 | Not Available | Negative | 5214492 - 5214815 | 11412.5 |
| transcriptional regulator | PMI12_04962 | Not Available | Positive | 5214898 - 5215833 | 33883.8 |
| secreted/surface protein with fasciclin-like repeats | PMI12_04963 | Not Available | Negative | 5215868 - 5216443 | 18987.3 |
| hypothetical protein | PMI12_04964 | Not Available | Positive | 5216850 - 5217065 | 8014.58 |
| arabinose efflux permease family protein | PMI12_04965 | Not Available | Negative | 5217134 - 5218402 | 44409.5 |
| malate synthase g | PMI12_04966 | Not Available | Negative | 5218529 - 5220703 | 77861.2 |
| transcriptional regulator | PMI12_04967 | Not Available | Negative | 5220833 - 5221573 | 26740.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
