Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyl phosphate reductase | PMI12_04948 | Not Available | Positive | 5199783 - 5201075 | 45596.1 |
| glutamate--cysteine ligase, ferrooxidans family | PMI12_04949 | Not Available | Positive | 5201172 - 5202491 | 48267.2 |
| k+ transporter | PMI12_04950 | Not Available | Positive | 5202672 - 5204540 | 67887.1 |
| putative xylanase/chitin deacetylase | PMI12_04951 | Not Available | Negative | 5204559 - 5205482 | 34694.3 |
| hypothetical protein | PMI12_04952 | Not Available | Negative | 5205493 - 5205921 | 15689.7 |
| glutathione synthetase | PMI12_04953 | Not Available | Positive | 5206119 - 5207126 | 36973.8 |
| putative glutamine amidotransferase | PMI12_04954 | Not Available | Negative | 5207115 - 5207864 | 28393.3 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_04955 | Not Available | Negative | 5207933 - 5209072 | 39413.6 |
| drug resistance transporter, emrb/qaca subfamily | PMI12_04956 | Not Available | Negative | 5209150 - 5210637 | 52008.0 |
| hypothetical protein | PMI12_04957 | Not Available | Positive | 5210768 - 5212087 | 48347.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
