Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| organic radical activating enzyme | PMI12_04928 | Not Available | Negative | 5178193 - 5178831 | 23406.9 |
| pantoate--beta-alanine ligase | PMI12_04929 | Not Available | Negative | 5178828 - 5179670 | 31094.7 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | PMI12_04930 | Not Available | Negative | 5179680 - 5180576 | 31146.9 |
| l-aspartate oxidase | PMI12_04931 | Not Available | Negative | 5180650 - 5182221 | 56794.6 |
| hypothetical protein | PMI12_04932 | Not Available | Negative | 5182264 - 5183100 | 31896.0 |
| protein of unknown function (duf3460) | PMI12_04933 | Not Available | Negative | 5183177 - 5183383 | 8172.75 |
| hypothetical protein | PMI12_04934 | Not Available | Positive | 5183453 - 5183926 | 17395.7 |
| sulfate permease-like transporter, mfs superfamily | PMI12_04935 | Not Available | Negative | 5183930 - 5185609 | 59038.5 |
| methionyl-trna formyltransferase | PMI12_04936 | Not Available | Positive | 5185732 - 5187450 | 62340.7 |
| hypothetical protein | PMI12_04937 | Not Available | Negative | 5187466 - 5187672 | 6358.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
