Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inosine-uridine nucleoside n-ribohydrolase | PMI12_04914 | Not Available | Positive | 5165610 - 5166581 | 34720.7 |
| putative dienelactone hydrolase | PMI12_04915 | Not Available | Positive | 5166686 - 5167735 | 37139.6 |
| hypothetical protein | PMI12_04916 | Not Available | Negative | 5167823 - 5168131 | 11531.2 |
| Trna-ala | Not Available | Not Available | Positive | 5171626 - 5171701 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 5171741 - 5171817 | Not Available |
| protein-export chaperone secb | PMI12_04923 | Not Available | Positive | 5174113 - 5174577 | 16804.1 |
| glycerol-3-phosphate dehydrogenase | PMI12_04924 | Not Available | Positive | 5174603 - 5175643 | 35228.4 |
| nicotinate-nucleotide pyrophosphorylase | PMI12_04925 | Not Available | Positive | 5175669 - 5176547 | 30993.4 |
| quinolinate synthetase complex, a subunit | PMI12_04926 | Not Available | Positive | 5176555 - 5177670 | 39831.7 |
| 6-pyruvoyl-tetrahydropterin synthase | PMI12_04927 | Not Available | Negative | 5177786 - 5178148 | 13865.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
