Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | PMI12_04894 | Not Available | Positive | 5143362 - 5145539 | 81279.1 |
| dihydroorotase, homodimeric type | PMI12_04895 | Not Available | Negative | 5145807 - 5146838 | 37877.4 |
| rna polymerase sigma factor, sigma-70 family | PMI12_04896 | Not Available | Negative | 5146835 - 5147377 | 19703.8 |
| protein of unknown function (duf2892) | PMI12_04897 | Not Available | Negative | 5147381 - 5147596 | 7304.34 |
| regulator of competence-specific genes | PMI12_04898 | Not Available | Positive | 5147772 - 5148128 | 13095.9 |
| ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase | PMI12_04899 | Not Available | Positive | 5148272 - 5148613 | 11832.1 |
| raf kinase inhibitor-like protein, ybhb/ybcl family | PMI12_04900 | Not Available | Positive | 5148638 - 5149219 | 19275.0 |
| diguanylate cyclase (ggdef) domain-containing protein | PMI12_04901 | Not Available | Positive | 5149295 - 5150794 | 56217.8 |
| transcriptional regulator | PMI12_04902 | Not Available | Negative | 5150802 - 5151716 | 34089.6 |
| 3-hydroxyacyl-coa dehydrogenase | PMI12_04903 | Not Available | Positive | 5151859 - 5153994 | 75979.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
