Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein releasing system, transmembrane protein, lolc/e family | PMI12_04884 | Not Available | Negative | 5128436 - 5129692 | 45404.9 |
| hypothetical protein | PMI12_04885 | Not Available | Positive | 5129835 - 5130797 | 33994.5 |
| single-stranded-dna-specific exonuclease recj | PMI12_04886 | Not Available | Positive | 5130794 - 5132515 | 61911.8 |
| short-chain dehydrogenase of unknown substrate specificity | PMI12_04887 | Not Available | Positive | 5132648 - 5133457 | 28694.3 |
| hypothetical protein | PMI12_04888 | Not Available | Positive | 5133645 - 5137793 | 147584.0 |
| ketopantoate reductase | PMI12_04889 | Not Available | Positive | 5137877 - 5139050 | 40931.0 |
| putative peroxidase-related enzyme | PMI12_04890 | Not Available | Negative | 5139045 - 5139641 | 21662.9 |
| cmd domain protein, avi_7170 family | PMI12_04891 | Not Available | Negative | 5139638 - 5140144 | 17441.0 |
| putative flavoprotein involved in k+ transport | PMI12_04892 | Not Available | Negative | 5140141 - 5141598 | 52694.5 |
| glycosidase | PMI12_04893 | Not Available | Positive | 5141692 - 5143356 | 61570.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
