Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_04874 | Not Available | Negative | 5118582 - 5119493 | 31996.5 |
| putative amino acid aldolase or racemase | PMI12_04875 | Not Available | Negative | 5119504 - 5120805 | 46861.9 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI12_04876 | Not Available | Negative | 5120802 - 5121785 | 35522.1 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI12_04877 | Not Available | Negative | 5121940 - 5122977 | 37341.7 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_04878 | Not Available | Negative | 5122977 - 5123816 | 30259.4 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_04879 | Not Available | Negative | 5123820 - 5124761 | 33248.7 |
| abc-type dipeptide transport system, periplasmic component | PMI12_04880 | Not Available | Negative | 5124793 - 5126370 | 57450.2 |
| endoribonuclease l-psp, putative | PMI12_04881 | Not Available | Positive | 5126562 - 5126951 | 14024.8 |
| protease subunit of atp-dependent protease | PMI12_04882 | Not Available | Negative | 5126969 - 5127583 | 22169.5 |
| lipoprotein releasing system, atp-binding protein | PMI12_04883 | Not Available | Negative | 5127682 - 5128443 | 26883.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
