Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_04864 | Not Available | Positive | 5108034 - 5108855 | 29365.6 |
| tripartite tricarboxylate transporter tctb family | PMI12_04865 | Not Available | Positive | 5109080 - 5109466 | 13565.3 |
| hypothetical protein | PMI12_04866 | Not Available | Positive | 5109483 - 5111003 | 53676.0 |
| hypothetical protein | PMI12_04867 | Not Available | Negative | 5111062 - 5111682 | 22092.0 |
| sulfate permease-like transporter, mfs superfamily | PMI12_04868 | Not Available | Positive | 5111819 - 5113459 | 56654.8 |
| selenocysteine lyase | PMI12_04869 | Not Available | Negative | 5113519 - 5114814 | 47365.7 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_04870 | Not Available | Negative | 5114818 - 5115714 | 31941.4 |
| transcriptional regulator | PMI12_04871 | Not Available | Positive | 5115855 - 5116778 | 33956.3 |
| hypothetical protein | PMI12_04872 | Not Available | Negative | 5116802 - 5116987 | 6704.78 |
| n-acyl-d-aspartate/d-glutamate deacylase | PMI12_04873 | Not Available | Negative | 5117113 - 5118585 | 52947.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
