Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_04854 | Not Available | Positive | 5096390 - 5097538 | 40168.7 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_04855 | Not Available | Positive | 5097650 - 5098678 | 36106.6 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_04856 | Not Available | Positive | 5098675 - 5100579 | 66833.5 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_04857 | Not Available | Positive | 5100576 - 5101307 | 26733.0 |
| phenylacetic acid degradation protein paan | PMI12_04858 | Not Available | Positive | 5101459 - 5103519 | 72666.8 |
| isoprenylcysteine carboxyl methyltransferase (icmt) family protein | PMI12_04859 | Not Available | Positive | 5103560 - 5104120 | 21239.3 |
| hypothetical protein | PMI12_04860 | Not Available | Positive | 5104211 - 5104660 | 16292.7 |
| pap2 superfamily protein | PMI12_04861 | Not Available | Positive | 5104819 - 5105415 | 21199.1 |
| glycosyl transferase | PMI12_04862 | Not Available | Positive | 5105412 - 5106464 | 38197.0 |
| pmt family glycosyltransferase, 4-amino-4-deoxy-l-arabinose transferase | PMI12_04863 | Not Available | Positive | 5106461 - 5108041 | 57449.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
