Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_04844 | Not Available | Negative | 5088439 - 5089080 | 23479.0 |
| isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase | PMI12_04845 | Not Available | Negative | 5089151 - 5089753 | 21186.7 |
| enoyl-coa hydratase/carnithine racemase | PMI12_04846 | Not Available | Positive | 5089904 - 5090707 | 27704.6 |
| phenylacetic acid degradation protein paad | PMI12_04847 | Not Available | Positive | 5090838 - 5091281 | 15821.8 |
| phenylacetate-coa ligase | PMI12_04848 | Not Available | Positive | 5091295 - 5092605 | 48296.8 |
| phenylacetate-coa oxygenase, paag subunit | PMI12_04849 | Not Available | Positive | 5092642 - 5093652 | 38203.4 |
| phenylacetate-coa oxygenase, paah subunit | PMI12_04850 | Not Available | Positive | 5093649 - 5093948 | 11382.4 |
| phenylacetate-coa oxygenase, paai subunit | PMI12_04851 | Not Available | Positive | 5093963 - 5094736 | 28637.1 |
| phenylacetate-coa oxygenase, paaj subunit | PMI12_04852 | Not Available | Positive | 5094733 - 5095257 | 18758.4 |
| phenylacetate-coa oxygenase/reductase, paak subunit | PMI12_04853 | Not Available | Positive | 5095270 - 5096355 | 39673.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
