Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family | PMI12_04834 | Not Available | Negative | 5079093 - 5079581 | 17192.9 |
| type ii secretory pathway, atpase pule/tfp pilus assembly pathway, atpase pilb | PMI12_04835 | Not Available | Negative | 5079708 - 5081504 | 66081.4 |
| spermidine synthase | PMI12_04836 | Not Available | Negative | 5081501 - 5082286 | 29204.1 |
| g:t/u mismatch-specific dna glycosylase | PMI12_04837 | Not Available | Negative | 5082286 - 5082861 | 20496.6 |
| hypothetical protein | PMI12_04838 | Not Available | Negative | 5082908 - 5083324 | 13949.7 |
| mg-dependent dnase | PMI12_04839 | Not Available | Negative | 5083454 - 5084314 | 30975.2 |
| trypsin-like serine protease with c-terminal pdz domain containing protein | PMI12_04840 | Not Available | Positive | 5084402 - 5085412 | 34438.4 |
| moxr-like atpase | PMI12_04841 | Not Available | Positive | 5085438 - 5086451 | 36929.0 |
| hypothetical protein | PMI12_04842 | Not Available | Positive | 5086432 - 5087421 | 36949.6 |
| mg-chelatase subunit chld | PMI12_04843 | Not Available | Positive | 5087418 - 5088455 | 37248.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
