Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_04815 | Not Available | Negative | 5061428 - 5062102 | 25281.4 |
| putative transcriptional regulator | PMI12_04816 | Not Available | Positive | 5062315 - 5062557 | 8834.79 |
| transcriptional regulator | PMI12_04817 | Not Available | Positive | 5062657 - 5063583 | 33161.1 |
| glutathione s-transferase | PMI12_04818 | Not Available | Negative | 5063569 - 5064261 | 25746.9 |
| Trna-arg | Not Available | Not Available | Positive | 5064569 - 5064643 | Not Available |
| transcriptional regulator | PMI12_04819 | Not Available | Negative | 5064687 - 5065358 | 24290.2 |
| rnd family efflux transporter, mfp subunit | PMI12_04820 | Not Available | Positive | 5065538 - 5066815 | 43767.4 |
| hydrophobe/amphiphile efflux-1 (hae1) family transporter | PMI12_04821 | Not Available | Positive | 5066834 - 5069998 | 112546.0 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | PMI12_04822 | Not Available | Positive | 5069991 - 5071412 | 50675.1 |
| hypothetical protein | PMI12_04823 | Not Available | Positive | 5071528 - 5072130 | 20554.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
