Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved repeat protein | PMI12_04805 | Not Available | Negative | 5041101 - 5048333 | 250498.0 |
| conserved repeat protein | PMI12_04806 | Not Available | Negative | 5048542 - 5051454 | 94696.0 |
| conserved repeat protein | PMI12_04807 | Not Available | Negative | 5051583 - 5052146 | 19020.0 |
| transcriptional regulator | PMI12_04808 | Not Available | Negative | 5052632 - 5053306 | 24690.1 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_04809 | Not Available | Positive | 5053821 - 5054555 | 27778.4 |
| putative transmembrane sensor domain protein | PMI12_04810 | Not Available | Positive | 5054631 - 5056979 | 84844.7 |
| hypothetical protein | PMI12_04811 | Not Available | Negative | 5056995 - 5057969 | 33828.0 |
| lactate dehydrogenase-like oxidoreductase | PMI12_04812 | Not Available | Negative | 5058063 - 5059061 | 35199.6 |
| citrate synthase | PMI12_04813 | Not Available | Positive | 5059077 - 5060312 | 43763.8 |
| restriction endonuclease | PMI12_04814 | Not Available | Negative | 5060708 - 5061337 | 23389.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
