Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_04795 | Not Available | Positive | 5026862 - 5027083 | 7984.58 |
| dna/rna helicase, superfamily ii | PMI12_04796 | Not Available | Negative | 5027120 - 5028583 | 53541.0 |
| putative metalloprotease | PMI12_04797 | Not Available | Negative | 5028715 - 5029599 | 31237.6 |
| deoxycytidine triphosphate deaminase | PMI12_04798 | Not Available | Negative | 5029709 - 5030242 | 19820.5 |
| putative periplasmic or secreted lipoprotein | PMI12_04799 | Not Available | Negative | 5030452 - 5031258 | 27856.3 |
| phosphoheptose isomerase | PMI12_04800 | Not Available | Negative | 5031255 - 5031899 | 21846.9 |
| tigr00252 family protein | PMI12_04801 | Not Available | Negative | 5032029 - 5032406 | 13636.2 |
| putative s-adenosylmethionine-dependent methyltransferase, yral family | PMI12_04802 | Not Available | Positive | 5032453 - 5033403 | 32717.1 |
| glutathione s-transferase, c-terminal domain containing protein | PMI12_04803 | Not Available | Negative | 5033400 - 5034128 | 26779.7 |
| conserved repeat protein | PMI12_04804 | Not Available | Negative | 5034212 - 5041120 | 227482.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
