Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative metal-dependent enzyme of the double-stranded beta helix superfamily | PMI12_04775 | Not Available | Negative | 5006289 - 5006879 | 21433.4 |
| transcriptional regulator | PMI12_04776 | Not Available | Positive | 5006987 - 5007859 | 31763.7 |
| diguanylate cyclase (ggdef) domain-containing protein | PMI12_04777 | Not Available | Negative | 5007887 - 5009434 | 55061.5 |
| putative hemolysin | PMI12_04778 | Not Available | Negative | 5009559 - 5010386 | 30146.1 |
| hypothetical protein | PMI12_04779 | Not Available | Negative | 5010395 - 5011489 | 39404.9 |
| methylase of polypeptide chain release factor | PMI12_04780 | Not Available | Negative | 5011489 - 5012433 | 33661.4 |
| hypothetical protein | PMI12_04781 | Not Available | Negative | 5012430 - 5013332 | 33283.6 |
| urease accessory protein ureh | PMI12_04782 | Not Available | Negative | 5013439 - 5014269 | 30226.3 |
| hypothetical protein | PMI12_04783 | Not Available | Negative | 5014354 - 5014452 | 3689.35 |
| hypothetical protein | PMI12_04784 | Not Available | Positive | 5014965 - 5016083 | 42508.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
