Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf3348) | PMI12_04765 | Not Available | Negative | 4994378 - 4995088 | 25824.5 |
| 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase | PMI12_04766 | Not Available | Negative | 4995202 - 4996401 | 43583.2 |
| carbon starvation protein, predicted membrane protein | PMI12_04767 | Not Available | Positive | 4996677 - 4998752 | 73642.6 |
| putative small protein | PMI12_04768 | Not Available | Positive | 4998757 - 4998963 | 7686.32 |
| tonb-dependent siderophore receptor | PMI12_04769 | Not Available | Positive | 4999168 - 5001327 | 78172.1 |
| sel1 repeat protein | PMI12_04770 | Not Available | Positive | 5001443 - 5001862 | 14946.1 |
| hypothetical protein | PMI12_04771 | Not Available | Positive | 5002014 - 5002289 | 9780.8 |
| cystathionine beta-lyase | PMI12_04772 | Not Available | Negative | 5002262 - 5003509 | 44969.6 |
| hypothetical protein | PMI12_04773 | Not Available | Negative | 5003555 - 5004565 | 34962.0 |
| rhodanese-related sulfurtransferase | PMI12_04774 | Not Available | Negative | 5004623 - 5006206 | 56522.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
