Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_04755 | Not Available | Negative | 4982978 - 4983706 | 26526.8 |
| signal transduction histidine kinase | PMI12_04756 | Not Available | Negative | 4983921 - 4985726 | 65167.0 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_04757 | Not Available | Negative | 4985746 - 4986414 | 23762.7 |
| hypothetical protein | PMI12_04758 | Not Available | Positive | 4986654 - 4988801 | 73390.5 |
| protein of unknown function (duf938) | PMI12_04759 | Not Available | Positive | 4988952 - 4989578 | 22791.5 |
| bacterial nucleoid dna-binding protein | PMI12_04760 | Not Available | Positive | 4989761 - 4990051 | 9770.6 |
| cell wall-associated hydrolase, invasion-associated protein | PMI12_04761 | Not Available | Positive | 4990175 - 4990705 | 18384.1 |
| protein of unknown function (duf2894) | PMI12_04762 | Not Available | Negative | 4990710 - 4991393 | 24263.7 |
| flagellar motor protein | PMI12_04763 | Not Available | Negative | 4991368 - 4992024 | 23507.1 |
| small-conductance mechanosensitive channel | PMI12_04764 | Not Available | Negative | 4992021 - 4994381 | 83925.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
