Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative pyrophosphatase | PMI12_04735 | Not Available | Positive | 4962397 - 4962723 | 12024.3 |
| urea abc transporter, urea binding protein | PMI12_04736 | Not Available | Positive | 4962840 - 4964108 | 45982.3 |
| urea abc transporter, permease protein urtb | PMI12_04737 | Not Available | Positive | 4964294 - 4965841 | 54396.9 |
| urea abc transporter, permease protein urtc | PMI12_04738 | Not Available | Positive | 4965838 - 4967076 | 44748.5 |
| urea abc transporter, atp-binding protein urtd | PMI12_04739 | Not Available | Positive | 4967073 - 4967951 | 31955.5 |
| urea abc transporter, atp-binding protein urte | PMI12_04740 | Not Available | Positive | 4967964 - 4968656 | 25320.2 |
| arabinose efflux permease family protein | PMI12_04741 | Not Available | Positive | 4968789 - 4970039 | 42168.6 |
| putative transmembrane transcriptional regulator (anti-sigma factor) | PMI12_04742 | Not Available | Negative | 4970052 - 4970735 | 24054.8 |
| rna polymerase sigma factor, sigma-70 family | PMI12_04743 | Not Available | Negative | 4970722 - 4971297 | 21820.7 |
| yvtn family beta-propeller repeat protein | PMI12_04744 | Not Available | Positive | 4971440 - 4972696 | 43049.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
