Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sua5/ycio/yrdc/ywlc family protein | PMI12_04725 | Not Available | Negative | 4951856 - 4952491 | 23196.0 |
| dmt(drug/metabolite transporter) superfamily permease | PMI12_04726 | Not Available | Negative | 4952510 - 4953487 | 35300.0 |
| putative metal-dependent phosphoesterase, php family | PMI12_04727 | Not Available | Negative | 4953484 - 4954341 | 30842.4 |
| mg2+/co2+ transporter | PMI12_04728 | Not Available | Negative | 4954439 - 4955482 | 38513.1 |
| phosphate/sulfate permease | PMI12_04729 | Not Available | Negative | 4955492 - 4957135 | 57254.2 |
| polyphosphate kinase 2, pa0141 family | PMI12_04730 | Not Available | Positive | 4957281 - 4958201 | 35999.2 |
| esterase, phb depolymerase family | PMI12_04731 | Not Available | Positive | 4958210 - 4959304 | 38747.3 |
| dna-binding domain-containing protein, arac-type | PMI12_04732 | Not Available | Negative | 4959328 - 4960254 | 32386.1 |
| hypothetical protein | PMI12_04733 | Not Available | Positive | 4960371 - 4960757 | 14131.8 |
| arabinose efflux permease family protein | PMI12_04734 | Not Available | Positive | 4960831 - 4962309 | 50381.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
