Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_04705 | Not Available | Negative | 4933818 - 4934195 | 13381.6 |
| protein of unknown function (duf1328) | PMI12_04706 | Not Available | Negative | 4934250 - 4934414 | 5633.4 |
| histidine kinase | PMI12_04707 | Not Available | Negative | 4934612 - 4935931 | 48692.6 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_04708 | Not Available | Positive | 4936062 - 4936694 | 23250.2 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_04709 | Not Available | Negative | 4936740 - 4937180 | 15967.0 |
| hypothetical protein involved in outer membrane biogenesis | PMI12_04710 | Not Available | Positive | 4937399 - 4939399 | 70484.8 |
| dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis | PMI12_04711 | Not Available | Negative | 4939396 - 4940172 | 27298.8 |
| c-terminal processing peptidase | PMI12_04712 | Not Available | Negative | 4940185 - 4941630 | 52471.9 |
| phosphoglycerate mutase, bpg-dependent, family 1 | PMI12_04713 | Not Available | Negative | 4941731 - 4942474 | 27761.9 |
| rhodanese-related sulfurtransferase | PMI12_04714 | Not Available | Positive | 4942547 - 4942963 | 14689.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
