Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | PMI12_04695 | Not Available | Positive | 4927604 - 4928371 | 28792.6 |
| gtp cyclohydrolase i | PMI12_04696 | Not Available | Positive | 4928445 - 4929176 | 27621.4 |
| sensor of blue-light using fad | PMI12_04697 | Not Available | Positive | 4929180 - 4929602 | 15319.5 |
| putative membrane protein | PMI12_04698 | Not Available | Positive | 4929639 - 4930520 | 31536.4 |
| hypothetical protein | PMI12_04699 | Not Available | Positive | 4930525 - 4931349 | 29328.3 |
| csbd-like protein | PMI12_04700 | Not Available | Positive | 4931475 - 4931672 | 6859.29 |
| putative periplasmic or secreted lipoprotein | PMI12_04701 | Not Available | Positive | 4931720 - 4932238 | 17257.4 |
| bacterioferritin (cytochrome b1) | PMI12_04702 | Not Available | Negative | 4932330 - 4932890 | 20631.1 |
| hypothetical protein | PMI12_04703 | Not Available | Negative | 4932887 - 4933411 | 19536.3 |
| protein of unknown function (duf1469) | PMI12_04704 | Not Available | Negative | 4933398 - 4933781 | 13218.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
