Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative effector of murein hydrolase | PMI12_04665 | Not Available | Negative | 4890884 - 4891612 | 24967.7 |
| putative effector of murein hydrolase lrga | PMI12_04666 | Not Available | Negative | 4891609 - 4891962 | 12792.3 |
| plp-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase | PMI12_04667 | Not Available | Negative | 4891985 - 4892974 | 35315.8 |
| cobalamin biosynthesis protein cobd | PMI12_04668 | Not Available | Negative | 4892971 - 4893945 | 35152.9 |
| mg chelatase, cobalamin biosynthesis protein cobn | PMI12_04669 | Not Available | Negative | 4893967 - 4897971 | 144276.0 |
| hypothetical protein | PMI12_04670 | Not Available | Negative | 4897968 - 4898324 | 12844.5 |
| biopolymer transport protein | PMI12_04671 | Not Available | Negative | 4898321 - 4898794 | 17281.6 |
| cob(ii)yrinic acid a,c-diamide reductase | PMI12_04672 | Not Available | Negative | 4898794 - 4899480 | 25780.1 |
| hypothetical protein | PMI12_04673 | Not Available | Negative | 4899671 - 4900648 | 34226.6 |
| rhs element vgr protein | PMI12_04674 | Not Available | Positive | 4901002 - 4903734 | 100623.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
