Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | PMI12_04655 | Not Available | Negative | 4878510 - 4879550 | 35536.1 |
| cobyric acid synthase cobq | PMI12_04656 | Not Available | Negative | 4879547 - 4880968 | 50350.2 |
| hypothetical protein | PMI12_04657 | Not Available | Positive | 4881175 - 4881408 | 8406.81 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | PMI12_04658 | Not Available | Negative | 4881473 - 4882966 | 52500.2 |
| hydrophobe/amphiphile efflux-1 (hae1) family transporter | PMI12_04659 | Not Available | Negative | 4882982 - 4886245 | 116152.0 |
| rnd family efflux transporter, mfp subunit | PMI12_04660 | Not Available | Negative | 4886412 - 4887662 | 44018.4 |
| esterase/lipase | PMI12_04661 | Not Available | Negative | 4887810 - 4888694 | 30524.2 |
| transcriptional regulator | PMI12_04662 | Not Available | Positive | 4888879 - 4889793 | 34113.9 |
| putative redox protein, regulator of disulfide bond formation | PMI12_04663 | Not Available | Negative | 4889800 - 4890261 | 17267.6 |
| putative acetyltransferase | PMI12_04664 | Not Available | Negative | 4890288 - 4890839 | 20322.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
