Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase serb | PMI12_04645 | Not Available | Positive | 4870623 - 4871336 | 25593.2 |
| malate/lactate dehydrogenase | PMI12_04646 | Not Available | Positive | 4871473 - 4872537 | 37573.3 |
| hypothetical protein | PMI12_04647 | Not Available | Negative | 4872544 - 4872870 | 12366.7 |
| deacetylase, histone deacetylase/acetoin utilization protein | PMI12_04648 | Not Available | Positive | 4872994 - 4874016 | 36508.9 |
| hypothetical protein | PMI12_04649 | Not Available | Positive | 4874083 - 4874310 | 7982.84 |
| transcriptional regulator with hth domain and aminotransferase domain containing protein | PMI12_04650 | Not Available | Negative | 4874320 - 4875507 | 42429.4 |
| endonuclease iii | PMI12_04651 | Not Available | Positive | 4875620 - 4876267 | 23876.2 |
| inhibitor of vertebrate lysozyme (ivy) | PMI12_04652 | Not Available | Positive | 4876280 - 4877119 | 30286.2 |
| fructose-2,6-bisphosphatase | PMI12_04653 | Not Available | Negative | 4877147 - 4877713 | 20298.9 |
| cobalamin-5-phosphate synthase | PMI12_04654 | Not Available | Negative | 4877710 - 4878504 | 26974.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
