Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (p)ppgpp synthetase, rela/spot family | PMI12_04635 | Not Available | Negative | 4858221 - 4860425 | 80556.5 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_04636 | Not Available | Negative | 4860473 - 4861462 | 35441.1 |
| 3-hydroxybutyrate dehydrogenase | PMI12_04637 | Not Available | Positive | 4861489 - 4862259 | 26927.3 |
| putative periplasmic/secreted protein | PMI12_04638 | Not Available | Negative | 4862287 - 4862991 | 24430.1 |
| hypothetical protein | PMI12_04639 | Not Available | Negative | 4863050 - 4863409 | 13026.7 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_04640 | Not Available | Positive | 4863582 - 4864313 | 27176.9 |
| signal transduction histidine kinase | PMI12_04641 | Not Available | Positive | 4864376 - 4865803 | 52446.2 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | PMI12_04642 | Not Available | Negative | 4865817 - 4866305 | 16974.5 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | PMI12_04643 | Not Available | Negative | 4866302 - 4867024 | 25511.8 |
| transcription-repair coupling factor mfd | PMI12_04644 | Not Available | Positive | 4867144 - 4870626 | 129183.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
