Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_04625 | Not Available | Negative | 4849966 - 4850394 | 15464.4 |
| yjef-like protein, hydroxyethylthiazole kinase-related protein | PMI12_04626 | Not Available | Positive | 4850436 - 4851896 | 49229.1 |
| short-chain alcohol dehydrogenase | PMI12_04627 | Not Available | Negative | 4851903 - 4852667 | 26522.8 |
| ribonuclease r | PMI12_04628 | Not Available | Negative | 4852722 - 4854881 | 79639.2 |
| Trna-leu | Not Available | Not Available | Positive | 4855065 - 4855149 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4855305 - 4855389 | Not Available |
| ribosomal protein s12 methylthiotransferase rimo | PMI12_04631 | Not Available | Negative | 4855474 - 4856880 | 50914.5 |
| polyhydroxyalkanoate synthesis repressor phar | PMI12_04632 | Not Available | Negative | 4856920 - 4857480 | 21116.8 |
| hypothetical protein | PMI12_04633 | Not Available | Negative | 4857555 - 4857923 | 13586.9 |
| Trna-val | Not Available | Not Available | Positive | 4858096 - 4858172 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
