Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | PMI12_04615 | Not Available | Negative | 4839805 - 4841178 | 49105.1 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | PMI12_04616 | Not Available | Negative | 4841208 - 4842368 | 40780.3 |
| cdp-diglyceride synthetase | PMI12_04617 | Not Available | Negative | 4842395 - 4843240 | 30563.7 |
| undecaprenyl diphosphate synthase | PMI12_04618 | Not Available | Negative | 4843260 - 4843979 | 26107.3 |
| ribosome recycling factor | PMI12_04619 | Not Available | Negative | 4843988 - 4844548 | 20613.8 |
| uridylate kinase | PMI12_04620 | Not Available | Negative | 4844560 - 4845282 | 25350.0 |
| translation elongation factor ts | PMI12_04621 | Not Available | Negative | 4845378 - 4846301 | 32517.2 |
| ribosomal protein s2 | PMI12_04622 | Not Available | Negative | 4846383 - 4847135 | 27460.2 |
| amidase, asp-trnaasn/glu-trnagln amidotransferase a subunit | PMI12_04623 | Not Available | Positive | 4847344 - 4848666 | 45888.0 |
| glycine/d-amino acid oxidase, deaminating | PMI12_04624 | Not Available | Positive | 4848723 - 4849976 | 44604.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
