Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase, large subunit | PMI12_04605 | Not Available | Negative | 4827248 - 4830496 | 117703.0 |
| carbamoyl-phosphate synthase, small subunit | PMI12_04606 | Not Available | Negative | 4830489 - 4831673 | 42110.6 |
| rrna methylase | PMI12_04607 | Not Available | Negative | 4831816 - 4832601 | 27414.1 |
| ribonuclease hii | PMI12_04608 | Not Available | Negative | 4832607 - 4833287 | 23996.1 |
| lipid-a-disaccharide synthase | PMI12_04609 | Not Available | Negative | 4833301 - 4834449 | 42108.4 |
| acyl-(acyl-carrier-protein)--udp-n- acetylglucosamine o-acyltransferase | PMI12_04610 | Not Available | Negative | 4834460 - 4835248 | 28002.6 |
| beta-hydroxyacyl-(acyl carrier protein) dehydratase fabz | PMI12_04611 | Not Available | Negative | 4835275 - 4835733 | 17050.2 |
| udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase | PMI12_04612 | Not Available | Negative | 4835757 - 4836734 | 34145.1 |
| outer membrane protein | PMI12_04613 | Not Available | Negative | 4836749 - 4837294 | 20270.0 |
| beta-barrel assembly machine subunit bama | PMI12_04614 | Not Available | Negative | 4837295 - 4839766 | 90946.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
