Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | PMI12_04595 | Not Available | Negative | 4818585 - 4819085 | 17748.3 |
| phosphoglucosamine mutase | PMI12_04596 | Not Available | Negative | 4819100 - 4820428 | 47072.3 |
| dihydropteroate synthase | PMI12_04597 | Not Available | Negative | 4820425 - 4821237 | 28518.6 |
| atp-dependent metalloprotease ftsh | PMI12_04598 | Not Available | Negative | 4821341 - 4823257 | 70138.6 |
| 23s rrna methylase | PMI12_04599 | Not Available | Negative | 4823425 - 4824186 | 27362.3 |
| putative rna-binding protein containing kh domain, possibly ribosomal protein | PMI12_04600 | Not Available | Positive | 4824202 - 4824606 | 14862.3 |
| hypothetical protein | PMI12_04601 | Not Available | Positive | 4824609 - 4825367 | 29106.8 |
| hypothetical protein | PMI12_04602 | Not Available | Negative | 4825401 - 4825796 | 14441.2 |
| transcription elongation factor grea | PMI12_04603 | Not Available | Negative | 4825829 - 4826305 | 17176.3 |
| protein of unknown function (duf2843) | PMI12_04604 | Not Available | Negative | 4826370 - 4827239 | 32656.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
