Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-asparaginase/glutrnagln amidotransferase subunit d | PMI12_04585 | Not Available | Negative | 4808417 - 4809382 | 32945.4 |
| sos regulatory protein lexa | PMI12_04586 | Not Available | Positive | 4809456 - 4810139 | 24859.3 |
| hypothetical protein | PMI12_04587 | Not Available | Positive | 4810278 - 4810655 | 13244.1 |
| phosphoglycerate dehydrogenase-like oxidoreductase | PMI12_04588 | Not Available | Positive | 4810745 - 4811752 | 36663.3 |
| arabinose efflux permease family protein | PMI12_04589 | Not Available | Positive | 4811749 - 4812906 | 39431.2 |
| 3-hydroxyacyl-coa dehydrogenase | PMI12_04590 | Not Available | Positive | 4812992 - 4814512 | 54474.6 |
| enoyl-coa hydratase/carnithine racemase | PMI12_04591 | Not Available | Positive | 4814519 - 4815298 | 27284.5 |
| camp-binding protein | PMI12_04592 | Not Available | Positive | 4815360 - 4816079 | 26879.3 |
| putative aminoglycoside phosphotransferase | PMI12_04593 | Not Available | Positive | 4816096 - 4817202 | 40855.7 |
| acyl-coa dehydrogenase | PMI12_04594 | Not Available | Positive | 4817231 - 4818505 | 46427.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
