Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tfp pilus assembly protein, tip-associated adhesin pily1 | PMI12_04575 | Not Available | Negative | 4798498 - 4801887 | 118555.0 |
| tfp pilus assembly protein pilx | PMI12_04576 | Not Available | Negative | 4801913 - 4802527 | 21802.5 |
| superoxide dismutase | PMI12_04577 | Not Available | Negative | 4802660 - 4802787 | 4865.75 |
| exodeoxyribonuclease vii, large subunit | PMI12_04578 | Not Available | Negative | 4802838 - 4804151 | 47373.2 |
| biopolymer transport protein | PMI12_04579 | Not Available | Positive | 4804407 - 4805099 | 24765.4 |
| biopolymer transport protein | PMI12_04580 | Not Available | Positive | 4805185 - 4805625 | 15766.0 |
| tetraacyldisaccharide 4''-kinase | PMI12_04581 | Not Available | Positive | 4805626 - 4806657 | 36824.5 |
| hypothetical protein | PMI12_04582 | Not Available | Positive | 4806638 - 4806820 | 6723.17 |
| 3-deoxy-d-manno-octulosonate cytidylyltransferase | PMI12_04583 | Not Available | Positive | 4806901 - 4807590 | 23996.5 |
| adenylate kinase family protein | PMI12_04584 | Not Available | Positive | 4807724 - 4808380 | 23620.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
