Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation/multidrug efflux pump | PMI12_04545 | Not Available | Negative | 4761681 - 4764758 | 111588.0 |
| rnd family efflux transporter, mfp subunit | PMI12_04546 | Not Available | Negative | 4764755 - 4765864 | 38232.6 |
| transcriptional regulator | PMI12_04547 | Not Available | Negative | 4765947 - 4766564 | 23123.7 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | PMI12_04548 | Not Available | Positive | 4766669 - 4768129 | 50856.3 |
| camp-binding protein | PMI12_04549 | Not Available | Negative | 4768140 - 4768835 | 25587.6 |
| tannase and feruloyl esterase | PMI12_04550 | Not Available | Positive | 4768937 - 4770523 | 54499.1 |
| hypothetical protein | PMI12_04551 | Not Available | Negative | 4771790 - 4772668 | 34015.9 |
| zonula occludens toxin | PMI12_04552 | Not Available | Negative | 4773273 - 4774514 | 45652.0 |
| protein of unknown function (duf2523) | PMI12_04553 | Not Available | Negative | 4774511 - 4774819 | 10472.5 |
| hypothetical protein | PMI12_04554 | Not Available | Negative | 4774823 - 4776286 | 49229.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
