Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/carnithine racemase | PMI12_04525 | Not Available | Negative | 4734139 - 4734915 | 27031.5 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_04526 | Not Available | Negative | 4734947 - 4736749 | 65062.3 |
| 3-hydroxyacyl-coa dehydrogenase | PMI12_04527 | Not Available | Negative | 4736751 - 4737707 | 34174.8 |
| hypothetical protein | PMI12_04528 | Not Available | Negative | 4737740 - 4738660 | 33416.3 |
| camp-binding protein | PMI12_04529 | Not Available | Positive | 4738789 - 4739496 | 26164.3 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_04530 | Not Available | Negative | 4739514 - 4740215 | 25362.1 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_04531 | Not Available | Negative | 4740301 - 4741047 | 26654.9 |
| non-ribosomal peptide synthase | PMI12_04532 | Not Available | Negative | 4741136 - 4742677 | 57043.7 |
| amino acid adenylation enzyme/thioester reductase family protein | PMI12_04533 | Not Available | Negative | 4742677 - 4745826 | 111844.0 |
| amino acid adenylation enzyme/thioester reductase family protein | PMI12_04534 | Not Available | Negative | 4745831 - 4751896 | 220985.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
