Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_04505 | Not Available | Negative | 4718815 - 4719270 | 15160.0 |
| hypothetical protein | PMI12_04506 | Not Available | Positive | 4719406 - 4719831 | 15320.9 |
| dna recombination-dependent growth factor c | PMI12_04507 | Not Available | Negative | 4719854 - 4720858 | 36135.8 |
| branched-chain amino acid aminotransferase, group i | PMI12_04508 | Not Available | Positive | 4720988 - 4721938 | 35100.9 |
| zinc-finger domain containing protein | PMI12_04509 | Not Available | Positive | 4721947 - 4722156 | 7592.14 |
| lipid a core-o-antigen ligase-like enyme | PMI12_04510 | Not Available | Negative | 4722202 - 4723440 | 45163.4 |
| adenylate cyclase, class 2 (thermophilic) | PMI12_04511 | Not Available | Positive | 4723717 - 4724232 | 18868.6 |
| lysophospholipase l1-like esterase | PMI12_04512 | Not Available | Negative | 4724233 - 4724826 | 20308.2 |
| putative integral membrane protein | PMI12_04513 | Not Available | Positive | 4725103 - 4725549 | 16744.5 |
| hypothetical protein | PMI12_04514 | Not Available | Negative | 4725609 - 4725869 | 9502.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
