Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type sugar transport system, atpase component | PMI12_04475 | Not Available | Negative | 4680929 - 4682440 | 53812.2 |
| abc-type sugar transport system, periplasmic component | PMI12_04476 | Not Available | Negative | 4682437 - 4683483 | 37319.9 |
| pentulose/hexulose kinase | PMI12_04477 | Not Available | Positive | 4683662 - 4685149 | 50473.6 |
| glycerol-3-phosphate dehydrogenase | PMI12_04478 | Not Available | Positive | 4685146 - 4686915 | 63494.5 |
| transcriptional regulator | PMI12_04479 | Not Available | Positive | 4686912 - 4687667 | 28347.1 |
| eama-like transporter family | PMI12_04480 | Not Available | Negative | 4687686 - 4688576 | 32172.4 |
| excinuclease abc, a subunit | PMI12_04481 | Not Available | Negative | 4688589 - 4691675 | 113244.0 |
| single stranded dna-binding protein | PMI12_04482 | Not Available | Positive | 4691848 - 4692405 | 19385.4 |
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | PMI12_04483 | Not Available | Positive | 4692641 - 4695961 | 121582.0 |
| hypothetical protein | PMI12_04484 | Not Available | Positive | 4696032 - 4696531 | 18756.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
