Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylase involved in ubiquinone/menaquinone biosynthesis | PMI12_04455 | Not Available | Positive | 4664308 - 4665057 | 28294.1 |
| ribonuclease hi | PMI12_04456 | Not Available | Positive | 4665100 - 4665549 | 16569.9 |
| molybdenum cofactor synthesis domain containing protein | PMI12_04457 | Not Available | Negative | 4665563 - 4666876 | 45862.6 |
| molybdopterin-guanine dinucleotide biosynthesis protein a, proteobacterial | PMI12_04458 | Not Available | Negative | 4666873 - 4667526 | 23373.1 |
| molybdenum cofactor biosynthesis protein a | PMI12_04459 | Not Available | Negative | 4667523 - 4668674 | 41449.9 |
| nad-dependent aldehyde dehydrogenase | PMI12_04460 | Not Available | Negative | 4668812 - 4670278 | 52503.5 |
| peroxiredoxin | PMI12_04461 | Not Available | Negative | 4670299 - 4670853 | 19695.4 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase | PMI12_04462 | Not Available | Positive | 4670997 - 4672571 | 57579.8 |
| sterol desaturase | PMI12_04463 | Not Available | Positive | 4672581 - 4673354 | 29187.4 |
| fatty acid desaturase | PMI12_04464 | Not Available | Positive | 4673479 - 4674276 | 30912.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
