Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii, subunit gamma/tau | PMI12_04445 | Not Available | Positive | 4654495 - 4656339 | 65782.7 |
| dna-binding protein, ybab/ebfc family | PMI12_04446 | Not Available | Positive | 4656395 - 4656727 | 11867.6 |
| recombination protein recr | PMI12_04447 | Not Available | Positive | 4656737 - 4657327 | 21022.3 |
| putative membrane protein | PMI12_04448 | Not Available | Positive | 4657355 - 4657735 | 13705.9 |
| abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | PMI12_04449 | Not Available | Positive | 4657873 - 4658910 | 36352.8 |
| abc-type nitrate/sulfonate/bicarbonate transport system, atpase component | PMI12_04450 | Not Available | Positive | 4658956 - 4659771 | 29722.7 |
| abc-type nitrate/sulfonate/bicarbonate transport system, permease component | PMI12_04451 | Not Available | Positive | 4659771 - 4660607 | 30348.7 |
| putative membrane protein | PMI12_04452 | Not Available | Positive | 4660678 - 4661862 | 42886.6 |
| soluble lytic murein transglycosylase-like protein | PMI12_04453 | Not Available | Negative | 4661896 - 4663503 | 58156.6 |
| hydroxyacylglutathione hydrolase | PMI12_04454 | Not Available | Negative | 4663500 - 4664288 | 28097.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
