Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate regulon sensor kinase phor | PMI12_04434 | Not Available | Positive | 4639065 - 4640402 | 49254.1 |
| putative efflux protein, mate family | PMI12_04435 | Not Available | Negative | 4640416 - 4641759 | 47744.6 |
| hypothetical protein | PMI12_04436 | Not Available | Negative | 4641756 - 4643492 | 63327.9 |
| ribosomal protein l31 | PMI12_04437 | Not Available | Negative | 4643571 - 4643840 | 10013.9 |
| putative dehydrogenase | PMI12_04438 | Not Available | Positive | 4644022 - 4645089 | 38304.7 |
| transcription termination factor rho | PMI12_04439 | Not Available | Negative | 4645144 - 4646409 | 47505.9 |
| thioredoxin | PMI12_04440 | Not Available | Negative | 4646592 - 4646924 | 12013.6 |
| recb family exonuclease | PMI12_04441 | Not Available | Positive | 4647082 - 4649661 | 92702.5 |
| atp-dependent exonuclase v beta subunit, helicase and exonuclease domain-containing | PMI12_04442 | Not Available | Positive | 4649658 - 4652918 | 119653.0 |
| flavoprotein, hi0933 family/uncharacterized flavoprotein, pp_4765 family | PMI12_04443 | Not Available | Positive | 4652915 - 4654156 | 43173.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
