Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mu transposase/integrase | PMI12_04414 | Not Available | Positive | 4616405 - 4618984 | 96468.8 |
| hypothetical protein | PMI12_04415 | Not Available | Positive | 4618981 - 4620120 | 41928.2 |
| hypothetical protein | PMI12_04416 | Not Available | Positive | 4620113 - 4621501 | 51090.7 |
| Trna-arg | Not Available | Not Available | Positive | 4621630 - 4621706 | Not Available |
| glycosyl transferase | PMI12_04418 | Not Available | Positive | 4621988 - 4623322 | 49832.2 |
| hypothetical protein | PMI12_04419 | Not Available | Positive | 4623319 - 4624275 | 35792.1 |
| Trna-pro | Not Available | Not Available | Positive | 4624387 - 4624463 | Not Available |
| glutathione s-transferase | PMI12_04421 | Not Available | Negative | 4624509 - 4625213 | 26321.7 |
| thioredoxin reductase | PMI12_04422 | Not Available | Negative | 4625322 - 4627001 | 58184.6 |
| putative hemolysin | PMI12_04423 | Not Available | Positive | 4627140 - 4628018 | 32142.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
