Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type transport system, involved in lipoprotein release, permease component | PMI12_04404 | Not Available | Positive | 4603013 - 4605619 | 89944.9 |
| penicilin amidase | PMI12_04405 | Not Available | Negative | 4605647 - 4608145 | 90408.2 |
| cysteine synthase | PMI12_04406 | Not Available | Positive | 4608243 - 4609319 | 39039.3 |
| putative secreted hydrolase | PMI12_04407 | Not Available | Positive | 4609316 - 4610395 | 39895.0 |
| hypothetical protein | PMI12_04408 | Not Available | Positive | 4610486 - 4610944 | 17256.2 |
| hypothetical protein | PMI12_04409 | Not Available | Negative | 4611007 - 4611141 | 5020.38 |
| hypothetical protein | PMI12_04410 | Not Available | Negative | 4611686 - 4612072 | 14366.6 |
| hypothetical protein | PMI12_04411 | Not Available | Negative | 4612773 - 4613066 | 10755.8 |
| hypothetical protein | PMI12_04412 | Not Available | Negative | 4613158 - 4613403 | 8818.42 |
| suppressor of fused protein (sufu) | PMI12_04413 | Not Available | Negative | 4613538 - 4614125 | 22193.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
