Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aerobic-type carbon monoxide dehydrogenase, small subunit coxs/cuts-like protein | PMI12_04394 | Not Available | Negative | 4594284 - 4594757 | 16091.2 |
| cytochrome c551/c552 | PMI12_04395 | Not Available | Negative | 4594792 - 4595187 | 13514.2 |
| trna isopentenyltransferase miaa | PMI12_04396 | Not Available | Positive | 4595433 - 4596467 | 36338.4 |
| abc-type antimicrobial peptide transport system, atpase component | PMI12_04397 | Not Available | Positive | 4596464 - 4597117 | 23046.8 |
| threonine dehydratase | PMI12_04398 | Not Available | Negative | 4597119 - 4598081 | 34250.2 |
| transcriptional regulator | PMI12_04399 | Not Available | Positive | 4598194 - 4598898 | 25455.5 |
| protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin | PMI12_04400 | Not Available | Positive | 4598895 - 4599770 | 32980.2 |
| putative homoserine dehydrogenase | PMI12_04401 | Not Available | Positive | 4599776 - 4601149 | 49125.8 |
| hypothetical protein | PMI12_04402 | Not Available | Positive | 4601255 - 4601620 | 13077.4 |
| putative rna polymerase sigma factor containing a tpr repeat domain containing protein | PMI12_04403 | Not Available | Positive | 4601676 - 4602908 | 43970.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
