Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | PMI12_04384 | Not Available | Positive | 4583554 - 4584237 | 25617.8 |
| glutaredoxin-dependent arsenate reductase | PMI12_04385 | Not Available | Positive | 4584234 - 4584614 | 14421.7 |
| iron-sulfur cluster binding protein, putative | PMI12_04386 | Not Available | Negative | 4584619 - 4585581 | 35527.5 |
| atpase, yjee family | PMI12_04387 | Not Available | Positive | 4585678 - 4586184 | 18370.7 |
| n-acetylmuramoyl-l-alanine amidase | PMI12_04388 | Not Available | Positive | 4586181 - 4587668 | 52244.0 |
| hypothetical protein | PMI12_04389 | Not Available | Positive | 4587819 - 4588106 | 9405.99 |
| putative membrane-associated protein | PMI12_04390 | Not Available | Negative | 4588167 - 4588826 | 24441.4 |
| dna mismatch repair protein mutl | PMI12_04391 | Not Available | Positive | 4588942 - 4590837 | 68365.2 |
| hypothetical protein | PMI12_04392 | Not Available | Positive | 4591025 - 4591978 | 34327.9 |
| aerobic-type carbon monoxide dehydrogenase, large subunit coxl/cutl-like protein | PMI12_04393 | Not Available | Negative | 4592027 - 4594273 | 80025.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
