Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-chain amino acid transport system, atpase component | PMI12_04353 | Not Available | Positive | 4546915 - 4547808 | 33031.2 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_04354 | Not Available | Positive | 4547821 - 4548750 | 32862.4 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_04355 | Not Available | Positive | 4548761 - 4549825 | 38335.0 |
| hypothetical protein | PMI12_04356 | Not Available | Positive | 4549867 - 4551219 | 48971.7 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_04357 | Not Available | Positive | 4551231 - 4552082 | 30921.5 |
| coenzyme f390 synthetase | PMI12_04358 | Not Available | Positive | 4552070 - 4553413 | 47639.4 |
| tannase and feruloyl esterase | PMI12_04359 | Not Available | Positive | 4553543 - 4555222 | 58879.6 |
| camp-binding protein | PMI12_04360 | Not Available | Negative | 4555273 - 4555962 | 25365.1 |
| nitroreductase | PMI12_04361 | Not Available | Positive | 4556166 - 4556912 | 28306.7 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_04362 | Not Available | Positive | 4556909 - 4558576 | 60380.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
