Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc-type transport system, permease component | PMI12_04343 | Not Available | Negative | 4531580 - 4532452 | 30965.0 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_04344 | Not Available | Negative | 4532487 - 4533689 | 42506.1 |
| aspartate/tyrosine/aromatic aminotransferase | PMI12_04345 | Not Available | Negative | 4533819 - 4535036 | 43526.1 |
| acetoacetyl-coa synthase | PMI12_04346 | Not Available | Negative | 4535178 - 4537238 | 75112.1 |
| hypothetical protein | PMI12_04347 | Not Available | Negative | 4537235 - 4539550 | 84156.2 |
| hypothetical protein | PMI12_04348 | Not Available | Negative | 4539547 - 4540524 | 34159.5 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | PMI12_04349 | Not Available | Negative | 4540572 - 4541981 | 49876.9 |
| transcriptional regulator | PMI12_04350 | Not Available | Positive | 4542053 - 4542970 | 33284.8 |
| tannase and feruloyl esterase | PMI12_04351 | Not Available | Negative | 4543004 - 4544683 | 58423.8 |
| amp-forming long-chain acyl-coa synthetase | PMI12_04352 | Not Available | Positive | 4544921 - 4546873 | 71289.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
