Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_04333 | Not Available | Positive | 4520905 - 4521393 | 17066.6 |
| transcriptional regulator | PMI12_04334 | Not Available | Negative | 4521659 - 4522585 | 33046.5 |
| transcriptional regulator | PMI12_04335 | Not Available | Positive | 4522684 - 4523652 | 34809.5 |
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | PMI12_04336 | Not Available | Negative | 4523664 - 4524380 | 25769.1 |
| short-chain alcohol dehydrogenase | PMI12_04337 | Not Available | Negative | 4524393 - 4525193 | 27905.8 |
| n-methylhydantoinase b/acetone carboxylase, alpha subunit | PMI12_04338 | Not Available | Negative | 4525193 - 4526881 | 60478.2 |
| n-methylhydantoinase a/acetone carboxylase, beta subunit | PMI12_04339 | Not Available | Negative | 4526894 - 4528984 | 73897.7 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_04340 | Not Available | Negative | 4529026 - 4529754 | 26590.6 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_04341 | Not Available | Negative | 4529772 - 4530542 | 28002.3 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_04342 | Not Available | Negative | 4530532 - 4531566 | 36562.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
