Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nadph-quinone reductase (modulator of drug activity b) | PMI12_04293 | Not Available | Positive | 4479595 - 4480314 | 25787.3 |
| transporter, monovalent cation:proton antiporter-2 (cpa2) family | PMI12_04294 | Not Available | Positive | 4480315 - 4482177 | 67409.1 |
| arabinose efflux permease family protein | PMI12_04295 | Not Available | Positive | 4482408 - 4483745 | 46134.6 |
| ring-hydroxylating dioxygenase, large terminal subunit | PMI12_04296 | Not Available | Positive | 4483788 - 4484843 | 39232.8 |
| flavodoxin reductase family protein | PMI12_04297 | Not Available | Positive | 4484840 - 4485805 | 34755.3 |
| transcriptional regulator | PMI12_04298 | Not Available | Positive | 4485878 - 4486345 | 17069.8 |
| transcriptional regulator | PMI12_04299 | Not Available | Positive | 4486472 - 4486975 | 17927.1 |
| acyl coa:acetate/3-ketoacid coa transferase | PMI12_04300 | Not Available | Negative | 4487040 - 4488611 | 55710.1 |
| acetyl-coa acetyltransferase | PMI12_04301 | Not Available | Negative | 4488674 - 4489921 | 43495.5 |
| acetyl-coa acetyltransferase | PMI12_04302 | Not Available | Negative | 4489925 - 4491136 | 42841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
