Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome oxidase assembly factor | PMI12_04283 | Not Available | Negative | 4471777 - 4472403 | 23007.8 |
| hypothetical protein | PMI12_04284 | Not Available | Negative | 4472433 - 4472549 | 4406.59 |
| cytochrome c oxidase, subunit i | PMI12_04285 | Not Available | Negative | 4472564 - 4474204 | 60962.4 |
| cytochrome c oxidase, subunit ii | PMI12_04286 | Not Available | Negative | 4474248 - 4475426 | 42776.7 |
| integral membrane protein | PMI12_04287 | Not Available | Negative | 4475486 - 4476001 | 19103.1 |
| hypothetical protein | PMI12_04288 | Not Available | Negative | 4476162 - 4477076 | 33833.6 |
| putative amidophosphoribosyltransferase | PMI12_04289 | Not Available | Positive | 4477130 - 4477825 | 24831.1 |
| rrna methylase, putative, group 2 | PMI12_04290 | Not Available | Positive | 4477857 - 4478318 | 17184.6 |
| acyl dehydratase | PMI12_04291 | Not Available | Negative | 4478339 - 4478800 | 17084.6 |
| atpase involved in chromosome partitioning | PMI12_04292 | Not Available | Negative | 4478881 - 4479501 | 22773.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
